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Custom Tools

I have a batch file that I use to convert the output of my banked project (4 Hex files) into one continuous binary file for downloading to my emulator. The batch file works fine and very quickly when run from the command line. However when I use the "Custom Tools" or "Run User Program" facilities the batch file does not execute, a command window is displayed but nothing else occurs.

1. Has anyone else experienced this problem or have any ideas how to solve it.

2. Is there a better way to generate the single file I require for my eprom emulator.

My target is Dallas 80C320 with 256Kbytes eprom arranged as 4 banks (0000 - FFFF).

Thanks in advance for any help given.